IL_7JQB_099
3D structure
- PDB id
- 7JQB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- SARS-CoV-2 Nsp1 and rabbit 40S ribosome complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GGCUCAGCGUG*CCGUUGAACCCC
- Length
- 23 nucleotides
- Bulged bases
- 7JQB|1|A|U|1585, 7JQB|1|A|G|1587
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7JQB|1|A|G|1540
7JQB|1|A|G|1541
7JQB|1|A|C|1542
7JQB|1|A|U|1543
7JQB|1|A|C|1544
7JQB|1|A|A|1545
7JQB|1|A|G|1546
7JQB|1|A|C|1547
7JQB|1|A|G|1548
7JQB|1|A|U|1549
7JQB|1|A|G|1550
*
7JQB|1|A|C|1582
7JQB|1|A|C|1583
7JQB|1|A|G|1584
7JQB|1|A|U|1585
7JQB|1|A|U|1586
7JQB|1|A|G|1587
7JQB|1|A|A|1588
7JQB|1|A|A|1589
7JQB|1|A|C|1590
7JQB|1|A|C|1591
7JQB|1|A|C|1592
7JQB|1|A|C|1593
Current chains
- Chain A
- rRNA
Nearby chains
- Chain E
- Ribosomal protein S3
- Chain G
- uS7
- Chain R
- Uncharacterized protein
- Chain U
- Uncharacterized protein
- Chain V
- uS10
- Chain a
- eS25
Coloring options: