IL_7JSW_040

3D structure

PDB id

7JSW (explore in PDB, NAKB, or RNA 3D Hub)

Description

ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-III)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GCCCAGACAG*UCGAGU

Length

16 nucleotides

Bulged bases

7JSW|1|1|A|1046

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7JSW|1|1|G|1042
7JSW|1|1|C|1043
7JSW|1|1|C|1044
7JSW|1|1|C|1045
7JSW|1|1|A|1046
7JSW|1|1|G|1047
7JSW|1|1|A|1048
7JSW|1|1|C|1049
7JSW|1|1|A|1050
7JSW|1|1|G|1051
*
7JSW|1|1|U|1108
7JSW|1|1|C|1109
7JSW|1|1|G|1110
7JSW|1|1|A|1111
7JSW|1|1|G|1112
7JSW|1|1|U|1113

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain f

50S ribosomal protein L6