IL_7JSW_041

3D structure

PDB id

7JSW (explore in PDB, NAKB, or RNA 3D Hub)

Description

ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-III)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GUUGGC*GCCAUC

Length

12 nucleotides

Bulged bases

7JSW|1|1|U|1061

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7JSW|1|1|G|1059
7JSW|1|1|U|1060
7JSW|1|1|U|1061
7JSW|1|1|G|1062
7JSW|1|1|G|1063
7JSW|1|1|C|1064
*
7JSW|1|1|G|1074
7JSW|1|1|C|1075
7JSW|1|1|C|1076
7JSW|1|1|A|1077
7JSW|1|1|U|1078
7JSW|1|1|C|1079

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain m

50S ribosomal protein L16