3D structure

PDB id
7JSW (explore in PDB, NAKB, or RNA 3D Hub)
Description
ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-III)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.8 Å

Loop

Sequence
GGAGGAAGGG*CAUUGACGUUAC
Length
22 nucleotides
Bulged bases
7JSW|1|3|U|485
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7JSW|1|3|G|446
7JSW|1|3|G|447
7JSW|1|3|A|448
7JSW|1|3|G|449
7JSW|1|3|G|450
7JSW|1|3|A|451
7JSW|1|3|A|452
7JSW|1|3|G|453
7JSW|1|3|G|454
7JSW|1|3|G|455
*
7JSW|1|3|C|477
7JSW|1|3|A|478
7JSW|1|3|U|479
7JSW|1|3|U|480
7JSW|1|3|G|481
7JSW|1|3|A|482
7JSW|1|3|C|483
7JSW|1|3|G|484
7JSW|1|3|U|485
7JSW|1|3|U|486
7JSW|1|3|A|487
7JSW|1|3|C|488

Current chains

Chain 3
16S ribosomal RNA

Nearby chains

Chain I
30S ribosomal protein S4
Chain U
30S ribosomal protein S16

Coloring options:

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