3D structure

PDB id
7JSW (explore in PDB, NAKB, or RNA 3D Hub)
Description
ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-III)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.8 Å

Loop

Sequence
GCAAGGGG*UUACCAACC
Length
17 nucleotides
Bulged bases
7JSW|1|1|A|896
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7JSW|1|1|G|875
7JSW|1|1|C|876
7JSW|1|1|A|877
7JSW|1|1|A|878
7JSW|1|1|G|879
7JSW|1|1|G|880
7JSW|1|1|G|881
7JSW|1|1|G|882
*
7JSW|1|1|U|894
7JSW|1|1|U|895
7JSW|1|1|A|896
7JSW|1|1|C|897
7JSW|1|1|C|898
7JSW|1|1|A|899
7JSW|1|1|A|900
7JSW|1|1|C|901
7JSW|1|1|C|902

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain m
50S ribosomal protein L16

Coloring options:

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