IL_7JSZ_014
3D structure
- PDB id
- 7JSZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-IV)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- UUAAC*GGGAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7JSZ_014 not in the Motif Atlas
- Homologous match to IL_5J7L_258
- Geometric discrepancy: 0.1426
- The information below is about IL_5J7L_258
- Detailed Annotation
- AAA cross-strand stack
- Broad Annotation
- AAA cross-strand stack
- Motif group
- IL_66798.2
- Basepair signature
- cWW-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 6
Unit IDs
7JSZ|1|1|U|606
7JSZ|1|1|U|607
7JSZ|1|1|A|608
7JSZ|1|1|A|609
7JSZ|1|1|C|610
*
7JSZ|1|1|G|618
7JSZ|1|1|G|619
7JSZ|1|1|G|620
7JSZ|1|1|A|621
7JSZ|1|1|G|622
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain d
- 50S ribosomal protein L4
- Chain l
- 50S ribosomal protein L15
Coloring options: