IL_7JSZ_173
3D structure
- PDB id
- 7JSZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-IV)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CAC*GAAG
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7JSZ_173 not in the Motif Atlas
- Geometric match to IL_6DME_003
- Geometric discrepancy: 0.195
- The information below is about IL_6DME_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_75527.1
- Basepair signature
- cWW-cWW-cSH-cWW
- Number of instances in this motif group
- 10
Unit IDs
7JSZ|1|3|C|1407
7JSZ|1|3|A|1408
7JSZ|1|3|C|1409
*
7JSZ|1|3|G|1491
7JSZ|1|3|A|1492
7JSZ|1|3|A|1493
7JSZ|1|3|G|1494
Current chains
- Chain 3
- 16S ribosomal RNA
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain 4
- mRNA
- Chain 8
- Peptidyl-tRNA hydrolase ArfB
- Chain Q
- 30S ribosomal protein S12
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