IL_7JT2_173
3D structure
- PDB id
- 7JT2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome stalled on long mRNA with ArfB bound in the A site
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CAC*GAAG
- Length
- 7 nucleotides
- Bulged bases
- 7JT2|1|3|A|1493
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7JT2_173 not in the Motif Atlas
- Geometric match to IL_3C3Z_002
- Geometric discrepancy: 0.2191
- The information below is about IL_3C3Z_002
- Detailed Annotation
- Decoding loop related
- Broad Annotation
- Decoding loop related
- Motif group
- IL_31737.3
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 12
Unit IDs
7JT2|1|3|C|1407
7JT2|1|3|A|1408
7JT2|1|3|C|1409
*
7JT2|1|3|G|1491
7JT2|1|3|A|1492
7JT2|1|3|A|1493
7JT2|1|3|G|1494
Current chains
- Chain 3
- 16S ribosomal RNA
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain 4
- mRNA
- Chain 8
- Peptidyl-tRNA hydrolase ArfB
- Chain Q
- 30S ribosomal protein S12
Coloring options: