IL_7JT2_192

3D structure

PDB id

7JT2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome stalled on long mRNA with ArfB bound in the A site

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CCU*AUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7JT2_192 not in the Motif Atlas

Geometric match to IL_7QQP_007

Geometric discrepancy: 0.2676

The information below is about IL_7QQP_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_07785.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

33

Unit IDs

7JT2|1|1|C|2103
7JT2|1|1|C|2104
7JT2|1|1|U|2105
*
7JT2|1|1|A|2184
7JT2|1|1|U|2185
7JT2|1|1|G|2186

Current chains

Chain 1

23S ribosomal RNA

Nearby chains