IL_7JT3_083

3D structure

PDB id

7JT3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rotated 70S ribosome stalled on long mRNA with ArfB-1 and ArfB-2 bound in the A site (+9-IV)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UUGAUGUGUAGGAUAGG*CCCUUUAA

Length

25 nucleotides

Bulged bases

7JT3|1|1|U|2111, 7JT3|1|1|U|2118

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7JT3|1|1|U|2105
7JT3|1|1|U|2106
7JT3|1|1|G|2107
7JT3|1|1|A|2108
7JT3|1|1|U|2109
7JT3|1|1|G|2110
7JT3|1|1|U|2111
7JT3|1|1|G|2112
7JT3|1|1|U|2113
7JT3|1|1|A|2114
7JT3|1|1|G|2115
7JT3|1|1|G|2116
7JT3|1|1|A|2117
7JT3|1|1|U|2118
7JT3|1|1|A|2119
7JT3|1|1|G|2120
7JT3|1|1|G|2121
*
7JT3|1|1|C|2177
7JT3|1|1|C|2178
7JT3|1|1|C|2179
7JT3|1|1|U|2180
7JT3|1|1|U|2181
7JT3|1|1|U|2182
7JT3|1|1|A|2183
7JT3|1|1|A|2184

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain 5

Transfer RNA; tRNA

Chain a

50S ribosomal protein L1