IL_7JT3_103
3D structure
- PDB id
- 7JT3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rotated 70S ribosome stalled on long mRNA with ArfB-1 and ArfB-2 bound in the A site (+9-IV)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CUGAAG*CGUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7JT3_103 not in the Motif Atlas
- Geometric match to IL_5J7L_351
- Geometric discrepancy: 0.1893
- The information below is about IL_5J7L_351
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_29471.1
- Basepair signature
- cWW-cWW-L-tHS-L-cWW
- Number of instances in this motif group
- 1
Unit IDs
7JT3|1|1|C|2806
7JT3|1|1|U|2807
7JT3|1|1|G|2808
7JT3|1|1|A|2809
7JT3|1|1|A|2810
7JT3|1|1|G|2811
*
7JT3|1|1|C|2889
7JT3|1|1|G|2890
7JT3|1|1|U|2891
7JT3|1|1|G|2892
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain B
- 50S ribosomal protein L32
- Chain c
- 50S ribosomal protein L3
- Chain s
- 50S ribosomal protein L22
Coloring options: