IL_7K00_181

3D structure

PDB id

7K00 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Bacterial Ribosome at 2 Angstrom Resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

1.98 Å

Loop

Sequence

UUAAUUGAUG*UUGAUCGAAG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7K00_181 not in the Motif Atlas

Homologous match to IL_5J7L_387

Geometric discrepancy: 0.0703

The information below is about IL_5J7L_387

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61249.1

Basepair signature

cWW-L-R-L-R-tHS-cWW-cWW-tSH-tHS-cWW-cWW

Number of instances in this motif group

1

Unit IDs

7K00|1|a|U|1851
7K00|1|a|U|1852
7K00|1|a|A|1853
7K00|1|a|A|1854
7K00|1|a|U|1855
7K00|1|a|U|1856
7K00|1|a|G|1857
7K00|1|a|A|1858
7K00|1|a|U|1859
7K00|1|a|G|1860
*
7K00|1|a|U|1882
7K00|1|a|U|1883
7K00|1|a|G|1884
7K00|1|a|A|1885
7K00|1|a|U|1886
7K00|1|a|C|1887
7K00|1|a|G|1888
7K00|1|a|A|1889
7K00|1|a|A|1890
7K00|1|a|G|1891

Current chains

Chain a

23S rRNA

Nearby chains