IL_7K50_018

3D structure

PDB id

7K50 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation non-frameshifting(CCA-A) complex (Structure I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UU*GGA

Length

5 nucleotides

Bulged bases

7K50|1|1|G|729

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7K50_018 not in the Motif Atlas

Geometric match to IL_7A0S_017

Geometric discrepancy: 0.1079

The information below is about IL_7A0S_017

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_00225.13

Basepair signature

cWW-L-cWW

Number of instances in this motif group

49

Unit IDs

7K50|1|1|U|702
7K50|1|1|U|703
*
7K50|1|1|G|728
7K50|1|1|G|729
7K50|1|1|A|730

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain b

50S ribosomal protein L2