IL_7K50_031

3D structure

PDB id

7K50 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation non-frameshifting(CCA-A) complex (Structure I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GG*UAC

Length

5 nucleotides

Bulged bases

7K50|1|1|A|896

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7K50_031 not in the Motif Atlas

Geometric match to IL_4V9F_032

Geometric discrepancy: 0.3994

The information below is about IL_4V9F_032

Detailed Annotation

Single bulged A

Broad Annotation

Single bulged A

Motif group

IL_31462.6

Basepair signature

cWW-L-cWW

Number of instances in this motif group

130

Unit IDs

7K50|1|1|G|880
7K50|1|1|G|881
*
7K50|1|1|U|895
7K50|1|1|A|896
7K50|1|1|C|897

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain 7

Transfer RNA; tRNA