IL_7K50_124

3D structure

PDB id

7K50 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation non-frameshifting(CCA-A) complex (Structure I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UAGU*AG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7K50_124 not in the Motif Atlas

Homologous match to IL_4LFB_012

Geometric discrepancy: 0.3072

The information below is about IL_4LFB_012

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_48100.3

Basepair signature

cWW-L-cWW

Number of instances in this motif group

8

Unit IDs

7K50|1|3|U|249
7K50|1|3|A|250
7K50|1|3|G|251
7K50|1|3|U|252
*
7K50|1|3|A|274
7K50|1|3|G|275

Current chains

Chain 3

16S ribosomal RNA

Nearby chains

Chain V

30S ribosomal protein S17