3D structure

PDB id
7K50 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Pre-translocation non-frameshifting(CCA-A) complex (Structure I)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.4 Å

Loop

Sequence
AAUUC*GUUAU
Length
10 nucleotides
Bulged bases
7K50|1|1|U|846, 7K50|1|1|U|931
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7K50_176 not in the Motif Atlas
Homologous match to IL_5J7L_399
Geometric discrepancy: 0.2208
The information below is about IL_5J7L_399
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_96236.1
Basepair signature
cWW-tWW-cWW-L-cWW
Number of instances in this motif group
1

Unit IDs

7K50|1|1|A|844
7K50|1|1|A|845
7K50|1|1|U|846
7K50|1|1|U|847
7K50|1|1|C|848
*
7K50|1|1|G|930
7K50|1|1|U|931
7K50|1|1|U|932
7K50|1|1|A|933
7K50|1|1|U|934

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain z
50S ribosomal protein L30

Coloring options:


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