IL_7K51_126

3D structure

PDB id

7K51 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mid-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UUG*CA

Length

5 nucleotides

Bulged bases

7K51|1|3|U|368

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7K51_126 not in the Motif Atlas

Geometric match to IL_2OIU_003

Geometric discrepancy: 0.2187

The information below is about IL_2OIU_003

Detailed Annotation

Single bulged U

Broad Annotation

No text annotation

Motif group

IL_97561.3

Basepair signature

cWW-L-cWW

Number of instances in this motif group

147

Unit IDs

7K51|1|3|U|367
7K51|1|3|U|368
7K51|1|3|G|369
*
7K51|1|3|C|392
7K51|1|3|A|393

Current chains

Chain 3

16S ribosomal RNA

Nearby chains

Chain 8

Elongation factor G

Chain U

30S ribosomal protein S16