IL_7K52_054

3D structure

PDB id

7K52 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Near post-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure III)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CUAU*AAAUG

Length

9 nucleotides

Bulged bases

7K52|1|1|U|1554

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7K52_054 not in the Motif Atlas

Homologous match to IL_5J7L_297

Geometric discrepancy: 0.1205

The information below is about IL_5J7L_297

Detailed Annotation

tSH-tHW

Broad Annotation

No text annotation

Motif group

IL_99646.2

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

6

Unit IDs

7K52|1|1|C|1437
7K52|1|1|U|1438
7K52|1|1|A|1439
7K52|1|1|U|1440
*
7K52|1|1|A|1551
7K52|1|1|A|1552
7K52|1|1|A|1553
7K52|1|1|U|1554
7K52|1|1|G|1555

Current chains

Chain 1

23S ribosomal RNA

Nearby chains