IL_7K52_135
3D structure
- PDB id
- 7K52 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Near post-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure III)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- GUGCCAG*CGGUAAUAC
- Length
- 16 nucleotides
- Bulged bases
- 7K52|1|3|A|532, 7K52|1|3|U|534
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7K52_135 not in the Motif Atlas
- Homologous match to IL_4LFB_021
- Geometric discrepancy: 0.4558
- The information below is about IL_4LFB_021
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_54177.4
- Basepair signature
- cWW-cSW-tWH-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 4
Unit IDs
7K52|1|3|G|515
7K52|1|3|U|516
7K52|1|3|G|517
7K52|1|3|C|518
7K52|1|3|C|519
7K52|1|3|A|520
7K52|1|3|G|521
*
7K52|1|3|C|528
7K52|1|3|G|529
7K52|1|3|G|530
7K52|1|3|U|531
7K52|1|3|A|532
7K52|1|3|A|533
7K52|1|3|U|534
7K52|1|3|A|535
7K52|1|3|C|536
Current chains
- Chain 3
- 16S ribosomal RNA
Nearby chains
- Chain 4
- mRNA
- Chain 8
- Elongation factor G
- Chain H
- 30S ribosomal protein S3
- Chain I
- 30S ribosomal protein S4
- Chain Q
- 30S ribosomal protein S12
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