IL_7K54_136
3D structure
- PDB id
- 7K54 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mid-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure II-FS)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GAAGGG*CAUUGAC
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7K54_136 not in the Motif Atlas
- Homologous match to IL_5J7L_023
- Geometric discrepancy: 0.1127
- The information below is about IL_5J7L_023
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_70801.1
- Basepair signature
- cWW-cWW-L-R-tWW-L-R-L-cWW
- Number of instances in this motif group
- 1
Unit IDs
7K54|1|3|G|450
7K54|1|3|A|451
7K54|1|3|A|452
7K54|1|3|G|453
7K54|1|3|G|454
7K54|1|3|G|455
*
7K54|1|3|C|477
7K54|1|3|A|478
7K54|1|3|U|479
7K54|1|3|U|480
7K54|1|3|G|481
7K54|1|3|A|482
7K54|1|3|C|483
Current chains
- Chain 3
- 16S ribosomal RNA
Nearby chains
- Chain U
- 30S ribosomal protein S16
Coloring options: