IL_7K55_082
3D structure
- PDB id
- 7K55 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Near post-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure III-FS)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GGAGG*CCGACCUUGAAAUAC
- Length
- 20 nucleotides
- Bulged bases
- 7K55|1|1|A|2126, 7K55|1|1|G|2168, 7K55|1|1|U|2172
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7K55_082 not in the Motif Atlas
- Homologous match to IL_5J7L_329
- Geometric discrepancy: 0.5524
- The information below is about IL_5J7L_329
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_87290.1
- Basepair signature
- cWW-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L
- Number of instances in this motif group
- 1
Unit IDs
7K55|1|1|G|2124
7K55|1|1|G|2125
7K55|1|1|A|2126
7K55|1|1|G|2127
7K55|1|1|G|2128
*
7K55|1|1|C|2160
7K55|1|1|C|2161
7K55|1|1|G|2162
7K55|1|1|A|2163
7K55|1|1|C|2164
7K55|1|1|C|2165
7K55|1|1|U|2166
7K55|1|1|U|2167
7K55|1|1|G|2168
7K55|1|1|A|2169
7K55|1|1|A|2170
7K55|1|1|A|2171
7K55|1|1|U|2172
7K55|1|1|A|2173
7K55|1|1|C|2174
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain 6
- Transfer RNA; tRNA
- Chain a
- 50S ribosomal protein L1
Coloring options: