IL_7KFN_001

3D structure

PDB id

7KFN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Human Adenosine Deaminase Acting on dsRNA (ADAR2) bound to dsRNA containing a 2'-deoxy Benner's Base Z opposite the edited base

Experimental method

X-RAY DIFFRACTION

Resolution

2.5 Å

Loop

Sequence

GAG*CCC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_87907.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

179

Unit IDs

7KFN|1|B|G|14
7KFN|1|B|A|15
7KFN|1|B|G|16
*
7KFN|1|C|C|8
7KFN|1|C|C|9
7KFN|1|C|C|10

Current chains

Chain B

Gli1 8AZ 23mer RNA

Chain C

Gli1 1W5 23mer RNA

Nearby chains

Chain A

Double-stranded RNA-specific editase 1

Chain D

Double-stranded RNA-specific editase 1