IL_7KGB_015
3D structure
- PDB id
- 7KGB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of A2296-methylated Mycobacterium tuberculosis ribosome bound with SEQ-9
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GUAC*GAGUGAAAGAGUAC
- Length
- 18 nucleotides
- Bulged bases
- 7KGB|1|A|G|592, 7KGB|1|A|A|596
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7KGB_015 not in the Motif Atlas
- Homologous match to IL_4WF9_015
- Geometric discrepancy: 0.1809
- The information below is about IL_4WF9_015
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_81516.2
- Basepair signature
- cWW-cWS-tSH-L-tWH-cWW-tSS-tSH-L-R-L
- Number of instances in this motif group
- 6
Unit IDs
7KGB|1|A|G|570
7KGB|1|A|U|571
7KGB|1|A|A|572
7KGB|1|A|C|573
*
7KGB|1|A|G|584
7KGB|1|A|A|585
7KGB|1|A|G|586
7KGB|1|A|U|587
7KGB|1|A|G|588
7KGB|1|A|A|589
7KGB|1|A|A|590
7KGB|1|A|A|591
7KGB|1|A|G|592
7KGB|1|A|A|593
7KGB|1|A|G|594
7KGB|1|A|U|595
7KGB|1|A|A|596
7KGB|1|A|C|597
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain S
- 50S ribosomal protein L22
- Chain U
- 50S ribosomal protein L24
Coloring options: