IL_7KGB_055

3D structure

PDB id

7KGB (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of A2296-methylated Mycobacterium tuberculosis ribosome bound with SEQ-9

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

ACUAAC*GGAACU

Length

12 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7KGB_055 not in the Motif Atlas

Geometric match to IL_6N5P_001

Geometric discrepancy: 0.2989

The information below is about IL_6N5P_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_74322.2

Basepair signature

cWW-tSH-L-R-L-R-L-R-cWW

Number of instances in this motif group

6

Unit IDs

7KGB|1|A|A|1568
7KGB|1|A|C|1569
7KGB|1|A|U|1570
7KGB|1|A|A|1571
7KGB|1|A|A|1572
7KGB|1|A|C|1573
*
7KGB|1|A|G|1631
7KGB|1|A|G|1632
7KGB|1|A|A|1633
7KGB|1|A|A|1634
7KGB|1|A|C|1635
7KGB|1|A|U|1636

Current chains

Chain A

23S rRNA

Nearby chains