IL_7KGB_104
3D structure
- PDB id
- 7KGB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of A2296-methylated Mycobacterium tuberculosis ribosome bound with SEQ-9
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- CUAGUAC*GGACCG
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7KGB_104 not in the Motif Atlas
- Geometric match to IL_7A0S_094
- Geometric discrepancy: 0.0911
- The information below is about IL_7A0S_094
- Detailed Annotation
- Sarcin-Ricin target in LSU H95; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_16458.6
- Basepair signature
- cWW-L-R-L-R-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 6
Unit IDs
7KGB|1|A|C|2890
7KGB|1|A|U|2891
7KGB|1|A|A|2892
7KGB|1|A|G|2893
7KGB|1|A|U|2894
7KGB|1|A|A|2895
7KGB|1|A|C|2896
*
7KGB|1|A|G|2901
7KGB|1|A|G|2902
7KGB|1|A|A|2903
7KGB|1|A|C|2904
7KGB|1|A|C|2905
7KGB|1|A|G|2906
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain G
- 50S ribosomal protein L6
Coloring options: