IL_7KGB_106
3D structure
- PDB id
- 7KGB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of A2296-methylated Mycobacterium tuberculosis ribosome bound with SEQ-9
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- UGCAC*GAUAG
- Length
- 10 nucleotides
- Bulged bases
- 7KGB|1|A|C|2927, 7KGB|1|A|A|2928
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7KGB_106 not in the Motif Atlas
- Homologous match to IL_4WF9_102
- Geometric discrepancy: 0.2142
- The information below is about IL_4WF9_102
- Detailed Annotation
- UAA/GAN related, with intercalation
- Broad Annotation
- UAA/GAN related, with intercalation
- Motif group
- IL_82016.1
- Basepair signature
- cWW-L-tHS-L-cWW
- Number of instances in this motif group
- 4
Unit IDs
7KGB|1|A|U|2925
7KGB|1|A|G|2926
7KGB|1|A|C|2927
7KGB|1|A|A|2928
7KGB|1|A|C|2929
*
7KGB|1|A|G|2956
7KGB|1|A|A|2957
7KGB|1|A|U|2958
7KGB|1|A|A|2959
7KGB|1|A|G|2960
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain D
- 50S ribosomal protein L3
- Chain N
- 50S ribosomal protein L17
- Chain P
- 50S ribosomal protein L19
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