IL_7KGB_141
3D structure
- PDB id
- 7KGB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of A2296-methylated Mycobacterium tuberculosis ribosome bound with SEQ-9
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GUGCCAG*CGGUAAUAC
- Length
- 16 nucleotides
- Bulged bases
- 7KGB|1|a|A|523, 7KGB|1|a|U|525, 7KGB|1|a|A|526
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7KGB_141 not in the Motif Atlas
- Homologous match to IL_4LFB_021
- Geometric discrepancy: 0.3943
- The information below is about IL_4LFB_021
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_52042.1
- Basepair signature
- cWW-cSW-tWH-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 5
Unit IDs
7KGB|1|a|G|506
7KGB|1|a|U|507
7KGB|1|a|G|508
7KGB|1|a|C|509
7KGB|1|a|C|510
7KGB|1|a|A|511
7KGB|1|a|G|512
*
7KGB|1|a|C|519
7KGB|1|a|G|520
7KGB|1|a|G|521
7KGB|1|a|U|522
7KGB|1|a|A|523
7KGB|1|a|A|524
7KGB|1|a|U|525
7KGB|1|a|A|526
7KGB|1|a|C|527
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain c
- 30S ribosomal protein S3
- Chain d
- 30S ribosomal protein S4
- Chain l
- 30S ribosomal protein S12
Coloring options: