IL_7KGB_156

3D structure

PDB id

7KGB (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of A2296-methylated Mycobacterium tuberculosis ribosome bound with SEQ-9

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GA*UAC

Length

5 nucleotides

Bulged bases

7KGB|1|a|A|1387

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7KGB_156 not in the Motif Atlas

Homologous match to IL_4LFB_035

Geometric discrepancy: 0.0688

The information below is about IL_4LFB_035

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_14190.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

160

Unit IDs

7KGB|1|a|G|915
7KGB|1|a|A|916
*
7KGB|1|a|U|1386
7KGB|1|a|A|1387
7KGB|1|a|C|1388

Current chains

Chain a

16S rRNA

Nearby chains

Chain e

30S ribosomal protein S5