IL_7KGB_161

3D structure

PDB id

7KGB (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of A2296-methylated Mycobacterium tuberculosis ribosome bound with SEQ-9

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

ACAG*CCUGU

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7KGB_161 not in the Motif Atlas

Geometric match to IL_8C3A_009

Geometric discrepancy: 0.3886

The information below is about IL_8C3A_009

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_90170.1

Basepair signature

cWW-L-R-L-cWW-cWW

Number of instances in this motif group

5

Unit IDs

7KGB|1|a|A|993
7KGB|1|a|C|994
7KGB|1|a|A|995
7KGB|1|a|G|996
*
7KGB|1|a|C|1028
7KGB|1|a|C|1029
7KGB|1|a|U|1030
7KGB|1|a|G|1031
7KGB|1|a|U|1032

Current chains

Chain a

16S rRNA

Nearby chains