IL_7KGB_172
3D structure
- PDB id
- 7KGB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of A2296-methylated Mycobacterium tuberculosis ribosome bound with SEQ-9
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- UACAAAG*UUAAAAG
- Length
- 14 nucleotides
- Bulged bases
- 7KGB|1|a|A|1278
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7KGB_172 not in the Motif Atlas
- Homologous match to IL_4LFB_051
- Geometric discrepancy: 0.2136
- The information below is about IL_4LFB_051
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_12056.1
- Basepair signature
- cWW-L-R-R-bif-cWW
- Number of instances in this motif group
- 2
Unit IDs
7KGB|1|a|U|1239
7KGB|1|a|A|1240
7KGB|1|a|C|1241
7KGB|1|a|A|1242
7KGB|1|a|A|1243
7KGB|1|a|A|1244
7KGB|1|a|G|1245
*
7KGB|1|a|U|1276
7KGB|1|a|U|1277
7KGB|1|a|A|1278
7KGB|1|a|A|1279
7KGB|1|a|A|1280
7KGB|1|a|A|1281
7KGB|1|a|G|1282
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain g
- 30S ribosomal protein S7
- Chain i
- 30S ribosomal protein S9
- Chain j
- 30S ribosomal protein S10
- Chain n
- 30S ribosomal protein S14 type Z
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