IL_7KGB_176

3D structure

PDB id

7KGB (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of A2296-methylated Mycobacterium tuberculosis ribosome bound with SEQ-9

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CCG*CAAG

Length

7 nucleotides

Bulged bases

7KGB|1|a|C|1393, 7KGB|1|a|A|1496

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7KGB_176 not in the Motif Atlas

Homologous match to IL_5J7L_058

Geometric discrepancy: 0.0999

The information below is about IL_5J7L_058

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61438.4

Basepair signature

cWW-L-cWW

Number of instances in this motif group

4

Unit IDs

7KGB|1|a|C|1392
7KGB|1|a|C|1393
7KGB|1|a|G|1394
*
7KGB|1|a|C|1494
7KGB|1|a|A|1495
7KGB|1|a|A|1496
7KGB|1|a|G|1497

Current chains

Chain a

16S rRNA

Nearby chains

Chain y

Transfer RNA; tRNA