IL_7KWG_042

3D structure

PDB id

7KWG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 30S ribosomal subunit in presence of spermidine

Experimental method

ELECTRON MICROSCOPY

Resolution

3.75 Å

Loop

Sequence

CUU*AAAG

Length

7 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7KWG_042 not in the Motif Atlas

Geometric match to IL_4N0T_004

Geometric discrepancy: 0.211

The information below is about IL_4N0T_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_32983.2

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

8

Unit IDs

7KWG|1|a|C|1009
7KWG|1|a|U|1010
7KWG|1|a|U|1011
*
7KWG|1|a|A|1050
7KWG|1|a|A|1051
7KWG|1|a|A|1052
7KWG|1|a|G|1053

Current chains

Chain a

16S ribosomal RNA

Nearby chains