IL_7KWG_045
3D structure
- PDB id
- 7KWG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 30S ribosomal subunit in presence of spermidine
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.75 Å
Loop
- Sequence
- UGCAU*AUG
- Length
- 8 nucleotides
- Bulged bases
- 7KWG|1|a|C|1066
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7KWG_045 not in the Motif Atlas
- Homologous match to IL_4LFB_044
- Geometric discrepancy: 0.2842
- The information below is about IL_4LFB_044
- Detailed Annotation
- Isolated cWS basepair
- Broad Annotation
- No text annotation
- Motif group
- IL_82453.2
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 6
Unit IDs
7KWG|1|a|U|1064
7KWG|1|a|G|1065
7KWG|1|a|C|1066
7KWG|1|a|A|1067
7KWG|1|a|U|1068
*
7KWG|1|a|A|1215
7KWG|1|a|U|1216
7KWG|1|a|G|1217
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain A
- mRNA
- Chain c
- 30S ribosomal protein S3
- Chain j
- 30S ribosomal protein S10
- Chain n
- 30S ribosomal protein S14 type Z
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