IL_7KWG_068

3D structure

PDB id

7KWG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 30S ribosomal subunit in presence of spermidine

Experimental method

ELECTRON MICROSCOPY

Resolution

3.75 Å

Loop

Sequence

GGAAGAACAUAUG*CUUGACGGUAC

Length

24 nucleotides

Bulged bases

7KWG|1|a|G|493, 7KWG|1|a|U|494

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7KWG|1|a|G|454
7KWG|1|a|G|455
7KWG|1|a|A|456
7KWG|1|a|A|457
7KWG|1|a|G|458
7KWG|1|a|A|459
7KWG|1|a|A|460
7KWG|1|a|C|461
7KWG|1|a|A|462
7KWG|1|a|U|463
7KWG|1|a|A|464
7KWG|1|a|U|465
7KWG|1|a|G|466
*
7KWG|1|a|C|486
7KWG|1|a|U|487
7KWG|1|a|U|488
7KWG|1|a|G|489
7KWG|1|a|A|490
7KWG|1|a|C|491
7KWG|1|a|G|492
7KWG|1|a|G|493
7KWG|1|a|U|494
7KWG|1|a|A|495
7KWG|1|a|C|496

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain d

30S ribosomal protein S4

Chain p

30S ribosomal protein S16