IL_7L08_034

3D structure

PDB id

7L08 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human 55S mitoribosome-RRFmt complex.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.49 Å

Loop

Sequence

ACG*CUAU

Length

7 nucleotides

Bulged bases

7L08|1|A|C|2718, 7L08|1|A|U|3100, 7L08|1|A|A|3101

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7L08_034 not in the Motif Atlas

Homologous match to IL_4WF9_079

Geometric discrepancy: 0.1558

The information below is about IL_4WF9_079

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_80025.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

8

Unit IDs

7L08|1|A|A|2717
7L08|1|A|C|2718
7L08|1|A|G|2719
*
7L08|1|A|C|3099
7L08|1|A|U|3100
7L08|1|A|A|3101
7L08|1|A|U|3102

Current chains

Chain A

16S RRNA

Nearby chains

Chain 0

39S ribosomal protein L32, mitochondrial

Chain E

39S ribosomal protein L3, mitochondrial

Chain T

39S ribosomal protein L22, mitochondrial