IL_7L08_048

3D structure

PDB id

7L08 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human 55S mitoribosome-RRFmt complex.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.49 Å

Loop

Sequence

AUC*GUGAU

Length

8 nucleotides

Bulged bases

7L08|1|A|G|3063, 7L08|1|A|A|3064

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7L08_048 not in the Motif Atlas

Homologous match to IL_4WF9_095

Geometric discrepancy: 0.1611

The information below is about IL_4WF9_095

Detailed Annotation

Isolated non-canonical cWW with bulges

Broad Annotation

Isolated non-canonical cWW with bulges

Motif group

IL_68118.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

28

Unit IDs

7L08|1|A|A|2997
7L08|1|A|U|2998
7L08|1|A|C|2999
*
7L08|1|A|G|3061
7L08|1|A|U|3062
7L08|1|A|G|3063
7L08|1|A|A|3064
7L08|1|A|U|3065

Current chains

Chain A

16S RRNA

Nearby chains

Chain 0

39S ribosomal protein L32, mitochondrial

Chain E

39S ribosomal protein L3, mitochondrial