IL_7L08_065

3D structure

PDB id

7L08 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human 55S mitoribosome-RRFmt complex.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.49 Å

Loop

Sequence

UUU*AA

Length

5 nucleotides

Bulged bases

7L08|1|AA|U|831

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7L08_065 not in the Motif Atlas

Geometric match to IL_4V9F_074

Geometric discrepancy: 0.2871

The information below is about IL_4V9F_074

Detailed Annotation

Single bulged U

Broad Annotation

No text annotation

Motif group

IL_97561.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

147

Unit IDs

7L08|1|AA|U|830
7L08|1|AA|U|831
7L08|1|AA|U|832
*
7L08|1|AA|A|855
7L08|1|AA|A|856

Current chains

Chain AA

12S rRNA

Nearby chains

Chain AM

28S ribosomal protein S16, mitochondrial

Chain AT

28S ribosomal protein S25, mitochondrial