IL_7L08_082

3D structure

PDB id

7L08 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human 55S mitoribosome-RRFmt complex.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.49 Å

Loop

Sequence

AUAUC*GCCCU

Length

10 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7L08_082 not in the Motif Atlas

Geometric match to IL_1KOG_007

Geometric discrepancy: 0.2297

The information below is about IL_1KOG_007

Detailed Annotation

C-loop

Broad Annotation

No text annotation

Motif group

IL_63596.12

Basepair signature

cWW-cWS-cSH-tWH-cWW-L

Number of instances in this motif group

22

Unit IDs

7L08|1|AA|A|1186
7L08|1|AA|U|1187
7L08|1|AA|A|1188
7L08|1|AA|U|1189
7L08|1|AA|C|1190
*
7L08|1|AA|G|1464
7L08|1|AA|C|1465
7L08|1|AA|C|1466
7L08|1|AA|C|1467
7L08|1|AA|U|1468

Current chains

Chain AA

12S rRNA

Nearby chains

Chain A2

Coiled-coil-helix-coiled-coil-helix domain-containing protein 1

Chain AF

28S ribosomal protein S7, mitochondrial

Chain AG

28S ribosomal protein S9, mitochondrial