IL_7L08_097

3D structure

PDB id

7L08 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human 55S mitoribosome-RRFmt complex.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.49 Å

Loop

Sequence

CACCC*GACAAG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7L08_097 not in the Motif Atlas

Geometric match to IL_5TBW_121

Geometric discrepancy: 0.3973

The information below is about IL_5TBW_121

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_05145.3

Basepair signature

cWW-cWW-cWW-cWW-cWW

Number of instances in this motif group

13

Unit IDs

7L08|1|AA|C|1491
7L08|1|AA|A|1492
7L08|1|AA|C|1493
7L08|1|AA|C|1494
7L08|1|AA|C|1495
*
7L08|1|AA|G|1554
7L08|1|AA|A|1555
7L08|1|AA|C|1556
7L08|1|AA|A|1557
7L08|1|AA|A|1558
7L08|1|AA|G|1559

Current chains

Chain AA

12S rRNA

Nearby chains

Chain A

Large subunit ribosomal RNA; LSU rRNA

Chain A3

Aurora kinase A-interacting protein

Chain AJ

28S ribosomal protein S12, mitochondrial