IL_7L08_099

3D structure

PDB id

7L08 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human 55S mitoribosome-RRFmt complex.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.49 Å

Loop

Sequence

ACUU*AUUU

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7L08_099 not in the Motif Atlas

Geometric match to IL_6MWN_005

Geometric discrepancy: 0.1697

The information below is about IL_6MWN_005

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_71194.2

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

35

Unit IDs

7L08|1|AA|A|1507
7L08|1|AA|C|1508
7L08|1|AA|U|1509
7L08|1|AA|U|1510
*
7L08|1|AA|A|1540
7L08|1|AA|U|1541
7L08|1|AA|U|1542
7L08|1|AA|U|1543

Current chains

Chain AA

12S rRNA

Nearby chains

Chain A0

28S ribosomal protein S34, mitochondrial

Chain A3

Aurora kinase A-interacting protein

Chain L

39S ribosomal protein L14, mitochondrial