IL_7L20_010

3D structure

PDB id

7L20 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human 39S mitoribosomal subunit in complex with RRFmt and EF-G2mt.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.15 Å

Loop

Sequence

AAG*UAU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7L20_010 not in the Motif Atlas

Geometric match to IL_5UNE_001

Geometric discrepancy: 0.2698

The information below is about IL_5UNE_001

Detailed Annotation

Isolated non-canonical cWW contact

Broad Annotation

No text annotation

Motif group

IL_87720.2

Basepair signature

cWW-L-R-cWW

Number of instances in this motif group

7

Unit IDs

7L20|1|A|A|1925
7L20|1|A|A|1926
7L20|1|A|G|1927
*
7L20|1|A|U|1977
7L20|1|A|A|1978
7L20|1|A|U|1979

Current chains

Chain A

16S rRNA mitochondrial

Nearby chains

Chain 2

39S ribosomal protein L34, mitochondrial

Chain 9

39S ribosomal protein L41, mitochondrial

Chain D

39S ribosomal protein L2, mitochondrial