IL_7LH5_046
3D structure
- PDB id
- 7LH5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with plazomicin, mRNA and tRNAs
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.27 Å
Loop
- Sequence
- UACAAAG*CAAAAAG
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7LH5_046 not in the Motif Atlas
- Homologous match to IL_5J7L_054
- Geometric discrepancy: 0.2621
- The information below is about IL_5J7L_054
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_09129.2
- Basepair signature
- cWW-L-R-tWH-L-R-L-tWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
7LH5|1|AA|U|1247
7LH5|1|AA|A|1248
7LH5|1|AA|C|1249
7LH5|1|AA|A|1250
7LH5|1|AA|A|1251
7LH5|1|AA|A|1252
7LH5|1|AA|G|1253
*
7LH5|1|AA|C|1284
7LH5|1|AA|A|1285
7LH5|1|AA|A|1286
7LH5|1|AA|A|1287
7LH5|1|AA|A|1288
7LH5|1|AA|A|1289
7LH5|1|AA|G|1290
Current chains
- Chain AA
- 16S ribosomal RNA
Nearby chains
- Chain AG
- 30S ribosomal protein S7
- Chain AI
- 30S ribosomal protein S9
- Chain AJ
- 30S ribosomal protein S10
- Chain AN
- 30S ribosomal protein S14 type Z
- Chain AU
- 30S ribosomal protein Thx
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