IL_7LH5_241
3D structure
- PDB id
- 7LH5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with plazomicin, mRNA and tRNAs
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.27 Å
Loop
- Sequence
- GGA*UAACC
- Length
- 8 nucleotides
- Bulged bases
- 7LH5|1|DA|G|776, 7LH5|1|DA|A|788, 7LH5|1|DA|A|789, 7LH5|1|DA|C|790
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7LH5_241 not in the Motif Atlas
- Geometric match to IL_7A0S_021
- Geometric discrepancy: 0.0849
- The information below is about IL_7A0S_021
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_89509.1
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 9
Unit IDs
7LH5|1|DA|G|775
7LH5|1|DA|G|776
7LH5|1|DA|A|777
*
7LH5|1|DA|U|787
7LH5|1|DA|A|788
7LH5|1|DA|A|789
7LH5|1|DA|C|790
7LH5|1|DA|C|791
Current chains
- Chain DA
- 23S ribosomal RNA
Nearby chains
- Chain D7
- 50S ribosomal protein L34
- Chain DD
- 50S ribosomal protein L2
- Chain DF
- 50S ribosomal protein L4
- Chain DW
- 50S ribosomal protein L22
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