IL_7LIU_001

3D structure

PDB id

7LIU (explore in PDB, NAKB, or RNA 3D Hub)

Description

DDX3X bound to ATP analog and remodeled RNA:DNA hybrid

Experimental method

X-RAY DIFFRACTION

Resolution

3.001 Å

Loop

Sequence

CCCG*CCCG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_45860.1

Basepair signature

cWW-L-R-L-R-cWW

Number of instances in this motif group

2

Unit IDs

7LIU|1|X|DC|708
7LIU|1|X|DC|709
7LIU|1|X|DC|710
7LIU|1|X|DG|711
*
7LIU|1|Y|DC|708
7LIU|1|Y|DC|709
7LIU|1|Y|DC|710
7LIU|1|Y|DG|711

Current chains

Chain X

5'-R(*GP*GP*GP*CP*GP*GP*G)-D(P*CP*CP*CP*GP*CP*CP*C)-3'

Chain Y

5'-R(*GP*GP*GP*CP*GP*GP*G)-D(P*CP*CP*CP*GP*CP*CP*C)-3'

Nearby chains

Chain A

ATP-dependent RNA helicase DDX3X

Chain B

ATP-dependent RNA helicase DDX3X