Motif IL_45860.1 Version IL_45860.1 of this group appears in releases 4.1 to 4.6
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | break | 5 | 6 | 7 | 8 | 1-8 | 2-7 | 3-6 | 4-5 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_6DLR_005 | 6DLR | 0.0000 | 1 | tWW and near cWH | A | Guanidine-I riboswitch | G | 77 | G | 78 | A | 79 | G | 80 | * | C | 92 | A | 93 | G | 95 | C | 96 | cWW | cBW | tWW | cWW |
| 2 | IL_7LIU_001 | 7LIU | 0.7550 | 0 | X+Y | RNA (14-mer) | DC | 708 | DC | 709 | DC | 710 | DG | 711 | * | DC | 708 | DC | 709 | DC | 710 | DG | 711 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GGAG*CAGGC | 1 |
| CCCG*CCCG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GA*AGG | 1 |
| CC*CC | 1 |
- Annotations
-
- tWW and near cWH (1)
- (1)
- Basepair signature
- cWW-L-R-L-R-cWW
- Heat map statistics
- Min 0.76 | Avg 0.38 | Max 0.76
Coloring options: