IL_7LS1_145
3D structure
- PDB id
- 7LS1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome from mouse bound to eEF2 (Class II)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- CAG*CGUGG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7LS1_145 not in the Motif Atlas
- Homologous match to IL_8C3A_108
- Geometric discrepancy: 0.2215
- The information below is about IL_8C3A_108
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_71241.2
- Basepair signature
- cWW-cWW-tSH-cWW-L-L
- Number of instances in this motif group
- 7
Unit IDs
7LS1|1|A2|C|3895
7LS1|1|A2|A|3896
7LS1|1|A2|G|3897
*
7LS1|1|A2|C|3915
7LS1|1|A2|G|3916
7LS1|1|A2|U|3917
7LS1|1|A2|G|3918
7LS1|1|A2|G|3919
Current chains
- Chain A2
- 28S rRNA
Nearby chains
- Chain B2
- 5S ribosomal RNA; 5S rRNA
- Chain E1
- 60S ribosomal protein L11
- Chain G2
- 60S ribosomal protein L5
- Chain N2
- 60S ribosomal protein L21
Coloring options: