IL_7LS1_216
3D structure
- PDB id
- 7LS1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome from mouse bound to eEF2 (Class II)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GGG*CGAUUC
- Length
- 9 nucleotides
- Bulged bases
- 7LS1|1|m2|U|430
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7LS1_216 not in the Motif Atlas
- Homologous match to IL_4V88_404
- Geometric discrepancy: 0.2223
- The information below is about IL_4V88_404
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_11347.3
- Basepair signature
- cWW-L-R-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
7LS1|1|m2|G|413
7LS1|1|m2|G|414
7LS1|1|m2|G|415
*
7LS1|1|m2|C|426
7LS1|1|m2|G|427
7LS1|1|m2|A|428
7LS1|1|m2|U|429
7LS1|1|m2|U|430
7LS1|1|m2|C|431
Current chains
- Chain m2
- 28S rRNA
Nearby chains
- Chain E3
- 40S ribosomal protein S23
- Chain L3
- 40S ribosomal protein S9
- Chain r2
- 40S ribosomal protein S4, X isoform
Coloring options: