IL_7LS1_262
3D structure
- PDB id
- 7LS1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome from mouse bound to eEF2 (Class II)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- CG*CAG
- Length
- 5 nucleotides
- Bulged bases
- 7LS1|1|m2|A|1491
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7LS1_262 not in the Motif Atlas
- Homologous match to IL_4V88_452
- Geometric discrepancy: 0.2519
- The information below is about IL_4V88_452
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_31462.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 127
Unit IDs
7LS1|1|m2|C|1339
7LS1|1|m2|G|1340
*
7LS1|1|m2|C|1490
7LS1|1|m2|A|1491
7LS1|1|m2|G|1492
Current chains
- Chain m2
- 28S rRNA
Nearby chains
- Chain A
- Isoform 3 of Plasminogen activator inhibitor 1 RNA-binding protein
- Chain C3
- 40S ribosomal protein S20
- Chain H3
- 40S ribosomal protein S29
- Chain J3
- 40S ribosomal protein S2
- Chain q2
- 40S ribosomal protein S3
- Chain y2
- 40S ribosomal protein S16
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