IL_7LS1_294
3D structure
- PDB id
- 7LS1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome from mouse bound to eEF2 (Class II)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- UUAA(P7G)*CCAUA
- Length
- 10 nucleotides
- Bulged bases
- 7LS1|1|A2|U|1872
- QA status
- Modified nucleotides: P7G
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7LS1_294 not in the Motif Atlas
- Homologous match to IL_8C3A_051
- Geometric discrepancy: 0.1584
- The information below is about IL_8C3A_051
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_89002.4
- Basepair signature
- cWW-tWH-cWW-L-cWW-tHS
- Number of instances in this motif group
- 15
Unit IDs
7LS1|1|A2|U|1707
7LS1|1|A2|U|1708
7LS1|1|A2|A|1709
7LS1|1|A2|A|1710
7LS1|1|A2|P7G|1711
*
7LS1|1|A2|C|1869
7LS1|1|A2|C|1870
7LS1|1|A2|A|1871
7LS1|1|A2|U|1872
7LS1|1|A2|A|1873
Current chains
- Chain A2
- 28S rRNA
Nearby chains
- Chain A1
- 60S ribosomal protein L7
- Chain B2
- 5S ribosomal RNA; 5S rRNA
- Chain K2
- 60S ribosomal protein L18
- Chain Y2
- 60S ribosomal protein L32
- Chain Z2
- 60S ribosomal protein L35a
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