IL_7LS2_002
3D structure
- PDB id
- 7LS2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome from mouse bound to eEF2 (Class I)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- AUC*GU
- Length
- 5 nucleotides
- Bulged bases
- 7LS2|1|A2|U|13
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7LS2_002 not in the Motif Atlas
- Homologous match to IL_8C3A_003
- Geometric discrepancy: 0.2187
- The information below is about IL_8C3A_003
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_83039.19
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 123
Unit IDs
7LS2|1|A2|A|12
7LS2|1|A2|U|13
7LS2|1|A2|C|14
*
7LS2|1|C2|G|143
7LS2|1|C2|U|144
Current chains
- Chain A2
- 28S rRNA
- Chain C2
- 5.8S rRNA
Nearby chains
- Chain B1
- 60S ribosomal protein L7a
- Chain H1
- 60S ribosomal protein L15
- Chain R2
- 60S ribosomal protein L23a
Coloring options: